Compass Calibration Issues

Using the latest stable build and QGC 2.9.7b when I calibrate my Zubax GPS and set rotation to none the compass points in the wrong direction. My pixhawk is yaw’d 270 degrees and to get the plane flying have to have the compass point the same direction as autopilot. This issue only exists with Zubax GPS, I tried to replicate with the standard pixhawk GPS and I2C compass and did not have the issue.